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2009年发表论文
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1、        Tian C, Xing G, Xie P, Lu K, Nie J, Wang J, Li L, Gao M, Zhang L, He F. KRAB-type zinc-finger protein Apak specifically regulates p53-dependent apoptosis. Nat Cell Biol. 2009, 11: 580-91. (IF 17.774)

 

2、        Ding L, Wang Z, Yan J, Yang X, Liu A, Qiu W, Zhu J, Han J, Zhang H, Lin J, Cheng Ding L, Wang Z, Yan J, Yang X, Liu A, Qiu W, Zhu J, Han J, Zhang H, Lin J, Cheng Human four-and-a-half LIM family members suppress tumor cell growth through a TGF-β–like signaling pathway. J Clin Invest. 2009, 119(2): 349–61.(IF 16.559)

 

3、        Alexander W Bell, Eric W Deutsch, Catherine E Au, Robert E Kearney, Ron Beavis, Salvatore Sechi, Tommy Nilsson, John J M Bergeron & HUPO Test Sample Working Group*(including Jia W, Song L, Li L, Wei J, Yang B, Wang J, Ying W, Zhang Y, Cai Y, Qian X, He F. et al). A HUPO test sample study reveals common problems in mass spectrometry–based proteomics. Nat Methods. 2009,6(6):423-30. (IF 13.651)

 

4、        Tang L, Yang J, Liu W, Tang X, Chen J, Zhao D, Wang M, Xu F, Lu Y, Liu B, Sun Q, Zhang L, He F. Liver sinusoidal endothelial cell lectin, LSECtin, negatively regulates hepatic T cell immune response. Gastroenterology. 2009,137(4):1498-508. (IF 12.591)

 

5、        Zhang X, Yang J, Guo Y, Ye H, Yu C, Xu C, Xu L, Wu S, Sun W, Wei H, Gao X, Zhu Y, Qian X, Jiang Y, Li Y, He F. Functional proteomic analysis of nonalcoholic fatty liver disease in rat models: ECHS1 down-regulation exacerbate hepatic steatosis. Hepatology. 2009, in press(IF 11.355)

 

6、        Shang Y, Liu Y, Du L, Wang Y, Cheng X, Xiao W, Wang X, Jin H, Yang X, Liu S, Chen Q. Targeted expression of uncoupling protein 2 to mouse liver increases the susceptibility to LPS/GalN-Induced acute liver injury. Hepatology. 2009, 50(4):1204-16. (IF 11.355)

 

7、        Li C, Cao C, Xu W, Cao M, Yang F, Dong L, Yu M, Zhan Y, Gao Y, Li W, Wang Z, Ge C, Wang Q, Peng R, Yang XM. Recombinant human Hepassocin stimulates proliferation of hepatocytes in vivo and Improves Survival in Rats with Fulminant Hepatic Failure. Gut. 2009, Nov 1. [Epub ahead of print](IF 9.766)

 

8、        Pan X, Zhao J, Zhang W, Li H, Mu R, Zhao T, Zhang H, Gong W, Yu M, Man J, Zhang P, Li A, Zhang X. Induction of SOX4 by DNA damage is critical for p53 stabilization and function. P Natl Acad Sci USA. 2009,106(10):3788-93. (IF 9.380)

 

9、        Liu W, Li D, Wang J, Xie H, Zhu Y, He F. Proteome-wide prediction of signal flow direction in protein interaction networks based on interacting domains. Mol Cell Proteomics. 2009,(9):2063-70. (IF 8.834)

 

10、    Zhang J, Ma J, Dou L, Wu S, Qian X, Xie H, Zhu Y, He F. Bayesian nonparametric model for the validation of peptide identification in shotgun proteomics. Mol Cell Proteomics. 2009,8(3): 547–57. (IF 8.834)

 

11、    Liu K, Qian L, Wang J, Li W, Deng X, Chen X, Sun W, Wei H, Qian X, Jiang Y, He F. Two-dimensional blue native/SDS PAGE analysis reveals HSPs chaperone machinery involved in HBV production in HepG2.2.15 cells. Mol Cell Proteomics.  2009,8: 495-505. (IF 8.834)

 

12、    Fang Q, Strand A, Law W, Faca V, Fitzgibbon M, Hamel N, Houle B, Liu X, May D, Poschmann G,Roy L, Stühler K,Ying W, Zhang J, Zheng Z, Bergeron J, Hanash S, He F, Leavitt B, Meyer H, Qian X, McIntosh M. Brain-specific Proteins Decline in the Cerebrospinal Fluid of Humans with Huntington's Disease. Mol Cell Proteomics. 2009,8: 451-66. (IF 8.834)

 

13、    Jia W, Lu Z, Fu Y,Wang H, Wang L, Chi H, Yuan Z, Zheng Z, Song L, Han H, Liang Y, Wang J, Cai Y, Zhang Y, Deng Y, Ying W, He S, Qian X. A strategy for precise and large-scale identification of core fucosylated glycoproteins. Mol Cell Proteomics. 2009,8: 913-23.  (IF 8.834)

 

14、    Zhu C, Li C, Li Y, Zhan Y, Li Y, Xu C, Xu W, Sun H, Yang XM.Cell growth suppression by thanatos-associated protein 11(THAP11) is mediated by transcriptional downregulation of c-Myc. Cell Death Differ. 2009, 16(3):395-405. (IF 7.548)

 

15、    Weng T, Mao F, Wang Y, Sun Q, Li R, Yang G, Zhang X, Luo J, Feng G, Yang X. Disruption of the molecular scaffold Gab1 in osteoblasts results in osteopenia and attenuation of insulin/IGF-1 signaling. 2009, J Cell Science. accepted (IF 6.427)

 

16、    Chen X, Wang H, Zhou G, Zhang X, Dong X, Zhi L, Jin L, He F. Molecular Population Genetics of Human CYP3A Locus: Signatures of Positive Selection and Implications for Evolutionary Environmental Medicine. Environ Health Perspective. 2009,117(10):1541-8. (IF 6.123)

 

17、    Gao Y, Yang G, Weng T, Du J, Wang X, Zhou J, Wang S, Yang X. Disruption of Smad4 in odontoblasts causes multiple keratocystic odontogenic tumors and tooth malformation in mice. Mol Cell Biol. 2009, 29(21):5941-51. (IF 5.942)

 

18、    Liu K, Zhang J, Wang J, Zhao L, Peng X, Jia W, Ying W, Zhu Y, Xie H, He F, Qian X. Relationship between Sample Loading Amount and Peptide Identification and Its Effects on Quantitative Proteomics. Anal Chem. 2009,81(4):1307-14. (IF 5.712)

 

19、    Sun A, Zhang J, Wang C, Yang D, Wei H, Zhu Y, Jiang Y, He F. Modified Spectral Count Index (mSCI) for Estimation of Protein Abundance by Protein Relative Identification Possibility (RIPpro): A New Proteomic Technological Parameter. J Proteome Res. 2009, 8: 4934-42.  (IF 5.684)

 

20、    Jiang Y, Ying W, Wu S, Chen M, Guan W, Yang D, Song Y, Liu X, Li J, Hao Y, Sun A, Geng C, Li H, Mi W, Zhang Y, Zhang J, Chen X, Li L, Gong Y, Li T, Ma J, Li D, Yuan X, Zhang X, Xue X, Zhu Y, Qian X, He F, Zhong F, Shen H, Lin C, Lu H, Liu X, Wei L, Cao J, Yun D, Zhang J, Gao M, Fan H, Zhang Y, Cheng G, Yu Y, Xie L, Wang H, Zhang X, Yang PY, Shi L, Tong W, Li X, Wang Y, Liu S, Sheng Q, Zeng R, Sun Y, Xu Y, Cai J, He P, Gao H, Zhao X, Tan Y, Yan H, Yang Y, Wang H, Huang J, Han ZG, He Q, Chen P, Liang S, Zhao M, Mao X, Wei L, Yu H, Cao Z, Li Y, Dai W, Jiang H, Wang D, Zheng J, Xue G, Tang Y, Li X, Cheng J, Liu Y, Zhang X, Wang X, Jia J, An D, Wang Z, Li Q, Cui T. First insight into human liver proteome from PROTEOMESKY-LIVERHu 1.0, a publicly-available database. J Proteome Res. 2009, Aug 5. DOI 10.1021/pr900532r  (IF 5.684)

 

21、    Sun A, Jiang Y, Wang X, Liu Q, Zhong F, He Q, Guan W, Li H, Sun Y, Shi L, Yu H, Yang D, Xu Y, Song Y, Tong W, Li D, Lin CL, Hao Y, Geng C, Yun D, Zhang X, Yuan X, Chen P, Zhu Y, Li Y, Liang S, Zhao XH, Liu S, He F. Liverbase: a comprehensive view of human liver biology. J Proteome Res. 2009, Aug 11. DOI 10.1021/pr900191p  (IF 5.684)

 

22、    Zhang J, Ma J, Dou L, Wu S, Qian X, Xie H, Zhu Y, He F. Mass Measurement Errors of Fourier-Transform Mass Spectrometry (FTMS): Distribution, Recalibration, and Application. J Proteome Res. 2009, 8(2):849-59. (IF 5.684)

 

23、    Yang L, Wang L, Yang X. Disruption of Smad4 in mouse epidermis leads to depletion of follicle stem cells. Mol Biol Cell. 2009, 20(3):882-890. (IF 5.558)

 

24、    Yu H, Yu M, Li C, Zhan Y, Xu W, Li Y, Li W, Wang Z, Ge C, Yang XM. Specific expression and regulation of hepassocin in the liver and down-regulation of the correlation of HNF1alpha with decreased levels of hepassocin in human hepatocellular carcinoma. J Biol Chem. 2009, 284(20):13335-47. (IF 5.52)

 

25、    Cao Y, Fu YL, Yu M, Yue PB, Ge CH, Xu WX, Zhan YQ, Li CY, Li W, Wang XH, Wang ZD, Li YH, Yang XM. Human augmenter of liver regeneration is important for hepatoma cell viability and resistance to radiation-induced oxidative stress. Free Radic Biol Med. 2009,47(7):1057-66. (IF 5.399)

 

26、    Deng X, Li W, Chen N, Sun Y, Wei H, Jiang Y, He F. Exploring the priming mechanism of liver regeneration: proteins and protein complexes. Proteomics. 2009,9:2202-16. (IF 4.586)

 

27、    Zhao L, Zhang Y, Wei J, Cao D, Liu K, Qian X. A Rapid Isolation and Identification Method for Blocked N-Terminal Peptides by Isothiocyanate-coupled Magnetic Nanoparticles and Mass Spectrometry. Proteomics. 2009,9(18):4416-20. (IF 4.586)

 

28、    Qu W, Shen Z, Zhao D, Yang Y, Zhang C. MFEprimer: Multiple factor evaluation of the specificity of PCR primers. Bioinformatics. 2009, 25:276-8. (IF 4.328)

 

29、    Wang J, Xu D, Chen H. A novel protein analytical method based on hybrid-aptamer and DNA-arrayed electrodes. Electrochem Commun. 2009,11:1627-30(IF 4.194)

 

30、    Duan X, Yue W, Liu L, Li Z, Li Y, He F, Zhu D, Zhou G, Wang S. Single-nucleotide polymorphism (SNP) genotyping using cationic conjugated polymers in homogeneous solution. Nat Protoc. 2009, 4(6):984-91. (IF 4.170)

 

31、    Hang X, Li P, Li Z, Qu W, Yu Y, Li H, Shen Z, Zheng H, Gao Y, Wu Y, Deng M, Sun Z, Zhang C.Transcription and splicing regulation in human umbilical vein endothelial cells under hypoxic stress conditions by exon array. BMC Genomics. 2009, 10:126. (IF 3.926).

 

32、    Zheng H, Hang X, Zhu J, Qian M, Qu W, Zheng C, Deng M. REMAS: a new regression model to identify alternative splicing of exon array data. BMC Bioinformatics. 2009, 10(Suppl 1):S18(IF 3.781)

 

33、    Fu Y, Jia W, Lu Z, Wang H, Yuan Z, Chi H, Li Y, Xiu L, Wang W, Liu C, Wang L, Sun R, Gao W, Qian X, He S. Efficient discovery of abundant post-translational modifications and spectral pairs using peptide mass and retention time differences. BMC Bioinformatics. 2009, 10(Suppl 1):S50. (IF 3.781)

 

34、    Xu Z, Hou B, Zhang Y, Gao Y, Wu Y, Zhao S, Zhang C. Antidepressive behaviors induced by enriched environment might be modulated by glucocorticoid levels. Eur Neuropsychopharm. 2009, 19:868-75.(IF 3.661)

 

35、    Yan X, Liu T, Yang S, Ding Q, Liu Y, Zhang X, Que H, Wei K, Luo Z, Liu S. Proteomic Profiling of the Insoluble Pellets of the Transected Rat Spinal Cord, J. Neurotraum.2009, 26(2):179-93 (IF 3.528)

 

36、    Sun W, Zhong F, Zhi L, Zhou G, He F. Systematic -omics analysis of HBV-associated liver diseases. Cancer Lett. 2009, 286:89-95.(IF 3.504)

 

37、    Qi Y, Wei J, Wang H, Zhang Y, Xu Y, Qian X, Guan Y. Improved selection of LMW over HMW proteins from human plasma by mesoporous silica particles with external modification. Talanta. 2009, 80:703-9. (IF 3.206)

 

38、    Liu T, Chen F, Tang N, Feng J, Zhao D, Wei K, Zhu Y, He F, Liu S, CD247 can bind SHC1, no matter if CD247 is phosphorylated, J Mol Recognit.2009, 22(3):205-14 (IF 3.16)

 

39、    Li T, Huang J, Jiang Y, Zeng Y, He F, Zhang MQ, Han Z, Zhang X. Multi-stage analysis of gene expression and transcription regulation in C57/B6 mouse liver development. Genomics. 2009, 93: 235-42. (IF 3.075)

 

40、    Yang S, Hou Z, Yang G, Zhang J, Hu Y, Sun J, Guo W, He D, Han D, Young W, Yang X. Chondrocyte-specific Smad4 gene conditional knockout results in hearing loss and inner ear malformation in mice. Dev Dynam. 2009, 238(8):1897-908(IF 3.018)

 

41、    Cao D, Zhang Y, Zhang H, Zhong L, Qian X. Systematic characterization of the covalent interactions between (—)-epigallocatechin gallate and peptides under physiological conditions by mass spectrometry. Rapid Commun Mass Spectrum. 2009,23:1147–57. (IF 2.772)

 

42、    Wu Z, Zhang X, Yang J, Wu G, Zhang Y, Yuan Y, Jin C, Chang Z,Wang J, Yang X, He F. Nuclear protein IkB-zetta inhibits the activity of STAT3. Biochem Biophys Res Co. 2009, 387(2):348-52.(IF 2.648)

 

43、    Xue Y, Wei J, Han H, Zhao L, Cao D, Wang J, Yang X, Zhang Y, Qian X. Application of open tubular capillary columns coated with zirconium phosphonate for enrichment of phosphopeptides. J Chromatogr B. 2009,877: 757–64. (IF 2.5)

 

44、    Yang S, Guo W, Hu Y, Sun Y, Hou Z, Sun J, Wang X, He D, Zhai S, Young W, Han D, Yang X. Smad5 haplo-insufficiency leads to hair cell and hearing loss. Dev Neurobiol. 2009, 69(2-3):153-61(IF 2.333)

 

45、    Zhao Z, Sun Y, Hou N, Teng Y, Wang Y, Yang X. Capn8 promoter directs the expression of Cre recombinase in gastric pit cells of transgenic mice. Genesis. 2009, 47(10):674-9. (IF 2.217)

 

46、    Dong X, Zhou G, Zhai Y, Zhang H, Yang H, Zhi L, Zhang X, Chu J, He F. Association of DLC1 gene polymorphism with susceptibility to hepatocellular carcinoma in Chinese hepatitis B virus carriers. Cancer Detect Prevent. 2009, 33(3-4):265-70. (IF 1.951)

 

47、    Li Y, Hao B, Kuai X, Xing G, Yang J, Chen J, Tang L, Zhang L, He F. C-type lectin LSECtin interacts with DC-SIGNR and is involved in hepatitis C virus binding. Mol. Cell. Biochem. 2009, 327: 183-90. (IF 1.764)

 

48、    Wang S, Tian C, Xiao T, Xing G, He F, Zhang L, Chen H. Differential regulation of Apak by various DNA damage signals. Mol. Cell. Biochem. Epub Jul 23, 2009, DOI 10.1007/s11010-009-0218-y (IF 1.764)

 

49、    Deng X, Li W, Sun Y, Wei H, Jiang Y, He F. Exploring rat plasmatic proteomes: what triggered the liver regeneration? Protein Peptide Lett. 2009,16:698-705. (IF 1.281)

 

50、    Guo Y,Zhang X,Huang J,Zeng Y,Liu W, Geng C,Li KW,Yang D,Wu S,Wei H,Han  Z,Qian  X,Jiang Y,He F.The molecular hinge for regulation of hepato genesis and hematopoiesis in mouse fetal liver explored with transcriptomic and proteomic approaches Plos One.2009,4(10):e7641.

 


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