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2013年发表论文
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1.       Zuo Y, Ren S, Wang M, Liu B, Yang J, Kuai X, Lin C, Zhao D, Tang L, He F.Novel Roles of LSECtin in Colon Carcinoma Cell Adhesion, Migration and in vivo Metastasis to the Liver. Gut. 2013; 62(8):1169-78.

 

2.       Ding C, Chan DW, Liu W, Liu M, Li D, Song L, Li C, Jin J, Malovannaya A, Jung SY, Zhen B, Wang Y, Qin J. Proteome-wide profiling of activated transcription factors with a concatenated tandem array of transcription factor response elements., ProcNatlAcadSci U S A. 2013 Apr 23;110(17):6771-6.

 

3.       Nie J, Liu L, Xing G, Zhang M, Wei R, Guo M, Li X, Xie P, Li L, He F, Han W, Zhang L. CKIP-1 acts as a colonic tumor suppressor by repressing oncogenic Smurf1 synthesis and promoting Smurf1 autodegradation. Oncogene, 2013 Sep 2 Epub ahead print

 

4.       Liu Z, Guo F, Zhang J, Wang J, Lu L, Li D*, He F*. Proteome-wide prediction of self-interacting proteins based on multiple properties. Mol Cell Proteomics. 2013 Jun;12(6):1689-700.

 

5.       Ding C, Jiang J, Wei J, Liu W, Zhang W, Liu M, Fu T, Lu T, Song L, Ying W, Chang C, Zhang Y, Ma J, Wei L, Malovannaya A, Jia L, Zhen B, Wang Y, He F, Qian X, Qin J. A fast workflow for identification and quantification of proteomes. Mol Cell Proteomics. 2013 Aug;12(8):2370-80.

 

6.       Liu Q, Ding C, Liu W, Song L, Liu M, Qi L, Fu T, Malovannaya A, Wang Y, Qin J, Zhen B. In-depth proteomic characterization of endogenous nuclear receptors in mouse liver. Mol Cell Proteomics. 2013 Feb;12(2):473-84.

 

7.       Nie J, Liu L, He F, Fu X, Han W, Zhang L. CKIP-1: A scaffold protein and potential therapeutic target integrating multiple signaling pathways and physiological functions. Ageing Res Rev. 2013, 12(1):276-81. (IF 5.953)

 

8.       Liu B, Wang M, Wang X, Zhao D, Liu D, Liu J, Chen P, Yang D, He F, Tang L. Liver Sinusoidal Endothelial Cell Lectin Inhibits CTL-Dependent Virus Clearance in Mouse Models of Viral Hepatitis. J Immunol. 2013. 190(8): 4185-95.

 

9.       Wanjun Zhang, Huanhuan Han, HaihongBai, Wei Tong, Yangjun Zhang, Weijie Qin, and XiaohongQian. A Highly Efficient and Visualized Method for Glycan Enrichment by Self-Assembling Pyrene Derivative Functionalized Free Graphene Oxide. Analytical Chemistry. 2013, 85(5): 2703–2709.

 

10.    Hongjun Lin, Yingfu Liu, JingruiHuo, Aihong Zhang, Yiting Pan, HaihongBai, Jiao Zhang, Tian Fang, Xin Wang, Yun Cai, Qingming Wang, Yangjun Zhang, and XiaohongQian. Modified Enzyme-Linked Immunosorbent Assay Strategy Using Graphene Oxide Sheets and Gold Nanoparticles Functionalized with Different Antibody Types. Analytical Chemistry, 2013, 85(13): 6228−6232.

 

11.    Yulin Sun, Guangzhou Gao, JianqiangCai, Youliang Wang, XiuhuaQu, Lidong He, Fang Liu, Yangjun Zhang, Kaixuan Lin, Shouzhi Ma, Xiao Yang, XiaohongQian and Xiaohang Zhao. Annexin A2 is a discriminative serological candidate in early hepatocellular carcinoma. Carcinogenesis, 2013, 34(3): 595–604.

 

12.    Cao Y, Zhang L. A Smurf1 tale: function and regulation of an ubiquitin ligase in multiple cellular networks. Cell Mol Life Sci. 2013, 70(13): 2305-17. (IF 5.615)

 

13.    Pei H, Wu X, Liu T, Yu K, Jelinek DF, Lou Z. The histone methyltransferase MMSET regulates class switch recombination. J Immunol. 2013 Jan 15;190(2):756-63.

 

14.    Yu, M., H.X. Guo, C. Hui, X.H. Wang, C.Y. Li, Y.Q. Zhan, C.H. Ge, and X.M. Yang. 2013. 14-3-3zeta interacts with hepatocyte nuclear factor 1alpha and enhances its DNA binding and transcriptional activation. BiochimBiophysActa. 1829:970-979.

 

15.    Leng L, Xu C, Wei C, Zhang J, Liu B, Ma J, Li N, Qin W, Zhang W, Zhang C, Xing X, Zhai L, Yang F, Li M, Jin C, Yuan Y, Xu P, Qin J, Xie H, He F, Wang J. A Proteomics Strategy for the Identification of FAT10-Modified Sites by Mass Spectrometry. J Proteome Res. 2013 Jul 18. [Epub ahead of print].

 

16.    Guo F, Wang D, Liu Z, Lu L, Zhang W, Sun H, Zhang H, Ma J, Wu S, Li N, Jiang Y, Zhu W, Qin J, Xu P, Li D, He F. CAPER: a Chromosome-Assembled human Proteome browsER. J Proteome Res. 2013 Jan 4;12(1):179-86.

 

17.    Lingyan Ping, Heng Zhang, LinhuiZhai, Eric B. Dammer,Duc M. Duong, Ning Li, ZiliYan,Junzhu Wu,*, and PingXu*. Quantitative proteomics reveals significant changes in cell shape and an energy shift after IPTG induction via an optimized SILAC approach for Escherichia coli.  Journal of Proteome Research  in press

 

18.    Yang Zhang,GuoquanYan,LinhuiZhai,§Ping Xu, ChengpuZhang,Liwei Li,‡,§ Cheng Chang,‡,§ Ning Li,‡,§ SongfengWu,YunpingZhu,Quanhui Wang, Bo Wen,LiangLin,YinzhuWang,GuiyanZheng,Lanping Zhou, Haojie Lu, Siqi Liu,* Fuchu He*. Proteome Atlas of Human Chromosome 8 and Its Multiple 8p Deficiencies in Tumorigenesis of the Stomach, Colon, and Liver.   Journal of Proteome Research  12(1):81-8

 

19.    Cheng Chang, Liwei Li, Chengpu Zhang, Songfeng Wu, Kun XiaohongQian, Ning Li, Qing-Yu He, Liang Lin, Pengyuan Yang, Yunping Zhu, Fuchu He, and Ping Xu. Systematic analyses of the transcriptome, translatome, and proteome provide a global view and potential strategy for the C-HPP. Journal of Proteome Research  [Epub ahead of print

 

20.    Chengpu Zhang, Ning Li, LinhuiZhai, Guoquan Yan, Yinkun Liu, Pengyuan Yang, Kun Guo, Wei Gu, Yang Chen, Gong Zhang, Qing-YuHe, Songfeng Wu, Tong Wang, HualiShen, Quanhui Wang, Yunping Zhu, Fuchu He, and Ping Xu. Systematic analysis of missing proteins provides clues to help define all of the protein-coding genes on human chromosome 1.   Journal of Proteome Research  [Epub ahead of print

 

21.    Quanhui Wang, Bo Wen,Guangrong YanPing Xu, YunpingZhu,XingfengYin,HualiShen,YangZhang,JingJiang,ChengpuZhang,Liwei LiCheng Chang,JieMa,Guoquan Yan, Jun YaoHaojie Lu, Wantao Ying,* Fan Zhong,*. Qualitative and quantitative expression status of the human chromosome 20 genes in cancer tissues and the representative cell lines Journal of Proteome Research  12(1):151-61

 

22.    Wu S, Li N, Ma J, Shen H, Jiang D, Chang C, Zhang C, Li L, Zhang H, Jiang J, Xu Z, Ping L, Chen T, Zhang W, Zhang T, Xing X, Yi T, Li Y, Fan F, Li X, Zhong F, Wang Q, Zhang Y, Wen B, Yan G, Lin L, Yao J, Lin Z, Wu F, Xie L, Yu H, Liu M, Lu H, Mu H, Li D, Zhu W, Zhen B, Qian X, Qin J, Liu S, Yang P, Zhu Y, Xu P, He F. First proteomic exploration of protein-encoding genes on chromosome 1 in human liver, stomach, and colon. J Proteome Res. 2013 Jan 4;12(1):67-80.

 

23.    LinhuiZhai, Cheng Chang, Ning Li, Duc M. Duong, Hao Chen, ZixinDeng,Jian Yang, Xuechuan Hong, Yunping Zhu and Ping Xu*. Systematic research on the pretreatment of peptides for quantitative proteomics using a C18 microcolumn. Proteomics 13(15):2229-37

 

24.    Xiaohua Xing*, Chengpu Zhang*, Ning Li, LinhuiZhai, Yunping Zhu, Xiaoming Yang, and Ping Xu*. Qualitative and quantitative analysis of the adult Drosophila melanogaster proteome.    Proteomics in press

 

25.    Ma J, Li W, Lv Y, Chang C, Wu S, Song L, Ding C, Wei H, He F, Jiang Y, Zhu Y. A new insight into the impact of different proteases on SILAC quantitative proteome of the mouse liver. Proteomics. 2013,13: 2238–42 (IF 4.82)

 

26.    Lu L, Hu S, Wei R, Qiu X, Lu K, Fu Y, Li H, Xing G, Li D, Peng R, He F, Zhang L. HECT type ubiquitin ligase NEDL2 is degraded by anaphase-promoting complex/cyclosome (APC/C)-Cdh1 and its tight regulation maintains the metaphase to anaphase transition. Journal of Biological Chemistry, 2013 Oct 25 Epub ahead print

 

27.    Wang Z, Feng K, Yue M, Lu X, Zheng Q, Zhang H, Zhai Y, Li P, Yu L, Cai M, Zhang X, Kang X, Shi W, Xia X, Chen X, Cao P, Li Y, Chen H, Ling Y, Li Y, He F, Zhou G. A non-synonymous SNP in the NOS2 associated with septic shock in patients with sepsis in Chinese populations. Hum Genet. 2013 Mar;132(3):337-46.

 

28.    Yang D, Ma Z, Lin W, Yang J, Tian C, Wei H, Jiang Y, He F. Identification of KAP-1-associated complexes negatively regulating the Ey and β-major globin genes in the β-globin locus. J Proteomics. 2013.80C:132-144.

 

29.    Xueying Wang, Xin Wang, Weijie Qin, Hongjun Lin, Jifeng Wang, Junying Wei, Yangjun Zhang and XiaohongQian. Metal–tag labeling coupled with multiple reaction monitoring-mass spectrometry for absolute quantitation of proteins. Analyst, 2013, 138(18): 5309-5317.

 

30.    Zhang S, Xu Z, Gao Y, Wu Y, Li Z, Liu H, Zhang C. Bidirectional crosstalk between stress-induced gastric ulcer and depression under chronic stress. PLoS ONE. 7(12):e51148 .

 

31.    Yang, H., Tan, Y., Zhang, T., Tang, L., Wang, J., Ke, Y., Guo, Z., Yang, X., Yang, R., and Du, Z. (2013). Identification of novel protein-protein interactions of Yersinia pestis type III secretion system by yeast two hybrid system. PLoS One 8, e54121.

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32.    Xinyuan Zhao, Cheng Ma, Huanhuan Han, Jing Jiang, Fang Tian, Jifeng Wang, Wantao Ying, XiaohongQian. Comparison and optimization of strategies for a more profound profiling of the sialylated N-glycoproteomics in human plasma using metal oxide enrichment. Analytical and Bioanalytical Chemistry, 2013, 405(16): 5519-5529.

 

33.    Zhao D, Zhang M, Wang M, Liu B, Wang X, Yang J, He F, Tang L. Up-regulation of Cbl-b is associated with LSECtin-mediated inhibition of different CD4(+) T-cell subsets. Immunobiology. 2013, 218 (4): 602-608

 

34.    Ren C, Li Y, Han R, Gao D, Li W, Shi J, Hoogewijs D, Braeckman BP, De Henau S, Lu Y, Qu W, Gao Y, Wu Y, Li Z, Liu H, Wang Z, Zhang C . GLB-13 is associated with oxidative stress resistance in Caenorhabditiselegans. IUBMB Life. 2013, 65(5):423-34.

 

35.    Yiting Pan, HaihongBai, ChengMa, YulinDeng, WeijieQin, XiaohongQian. Brush polymer modified and lectin immobilized core–shell microparticle for highly efficient glycoprotein /glycopeptide enrichment. Talanta, 2013, 115, 842–848.

 

36.    Cheng Ma, Xinyuan Zhao, Huanhuan Han, Wei Tong, Qi Zhang, Peibin Qin, Cheng Chang, Bo Peng, Wantao Ying, XiaohongQian. N-linked glycoproteome profiling of human serum using tandem enrichment and multiple fraction concatenation. Electrophoresis, 2013, 34(16): 2440-2450.

 

37.    Lu Y, Zhang Y, Hang X, Qu W, Lubec G, Chen C, Zhang C . Genome-wide computational identification of bicistronic mRNA in humans. Amino Acids. 2013, 44(2):597-606.

 

38.    Guo X, Zhou G, Tan W, Zhai Y, Deng G. Local selection of human populations shapes complex evolution patterns of CXCL10 gene. Immunogenetics. 2013 Sep;65(9):635-44.

 

39.    Li H, Sun C, Wang Y, Gao Y, Liu Y, Gao Y, Li X, Zhang C . Dynamic Expression Pattern of Neuro-oncological Ventral Antigen 1 (Nova1) in the Rat Brain after Focal Cerebral Ischemia/Reperfusion Insults. J HistochemCytochem. 2013, 61(1):45-54.

 

40.    Liang C, Zhang X, Song S, Tian C, Yin Y, Xing G, He F, Zhang L. Identification of UHRF1/2 as new N-methylpurine DNA glycosylase-interacting proteins. Biochemical and Biophysical Research Communications, 2013, 433(4): 415-419.

 

41.    Zhang L, Xia X, Zhang M, Wang Y, Yin X, Song L, He F, Zhang L. Integrated analysis of genomics and proteomics reveals that CKIP-1 is a novel macrophage migration regulator. Biochemical and Biophysical Research Communications, 2013, 436(3): 382-387

 

42.    Liu W, Li D, Zhu Y, Xie H, He F. Reconstruction of signaling network from protein interactions based on function annotations.IEEE/ACM Trans ComputBiolBioinform. 2013 Mar-Apr;10(2):514-21.

 

43.    Wanyan Deng, Xiangyu Fan, Xiaozhen Wang, Ying He, Zihui Li, Jie Song, Lingyan Ping, Lei Chang, Duc Minh Duong, Zongde Zhang, Ping Xu# and JianpingXie#. Mycobacterium Tuberculosis Biology Revealed by Pro  teome Profiling and Integration of Multi-omics Data—Proteomics Insight into M. Tuberculosis Systems Biology   Current Proteomics Volume 10261-268(8)

 


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